Publications
Chen, M., Uchiyama, A. Fane, B. A. (2007) Eliminating the
requirement of an essential gene product in an already very small
virus: scaffolding
protein B-free øX174, B-free. J. Mol. Biol. Accepted.
Uchiyama, A., Chen, M, Fane, B. A. (2007) Characterization
and function of putative substrate specificity domain in Microvirus
external scaffolding proteins. J. Virol. Accepted.
Skilton R. J. , Cutcliffe L. T., Pickett M. A., Lambden, P. R.,
Fane B. A. , Clarke I. N. (2007) Intracellular parasitism of
chlamydiae: the specific infectivity of chlamydiaphage Chp2, in
Chlamydophila abortus. J. Biol. Accepted.
Fane, B. A., Chen, M. Cherwa, J., Uchiyama, A. (2007) Single-stranded
Icosahedral Bacterial Viruses. Encyclopedia of Virology.
Elseveier, London. In press,
Fane, B. A., Brentlinger, K. L., Burch, A. D., Chen, M., Hafenstein, S.
Moore,
E., Novak, C. R. Uchiyama, A. (2006) øX174 et al.
The Microviridae.
In: The Bacteriophages. Ed. R. Calendar. Oxford Press.
Fane, B. A. The Microviridae. Virus Taxonomy: The
Classification and Nomenclature of Viruses. (2006) The Eighth Report of
the International
Committee on Taxonomy of Viruses . Eds: A. Ball, C. Fauquet,
M.
Mayo, J. Maniloff. Academic Press / Elsevier.
Uchiyama,
A. and Fane, B. A. (2005). Identification of an interacting
coat-external
scaffolding protein domain required for both the initiation of
øX174
procapsid morphogenesis and the completion of DNA packaging. J. Virol. 79: 6751-6.
Fane,
B. A. (2005) A four-dimensional structure of T4 infection. Nat
Struct Mol Biol. 12:739-40.
Clarke
I. N., Cutcliffe, L. T., Everson, J.S., Garner, S.A., Lambden, P.
R., Pead, P. J. , Pickett, M. A., Brentlinger, K. L., and Fane, B. A.
(2004). Chlamydiaphage Chp2, a skeleton in the øX174
closet: scaffolding protein and procapsid identification.
J Bacteriol. 22: 7571-4.
Morais
M. C., Fisher, M., Kanamaru, S., Przybyla, L., Burgner, J., Fane,
B. A.,
Rossmann, M. G. (2004). Conformational switching by the
scaffolding protein D directs the assembly of bacteriophage
øX174.
Mol Cell. 15: 991-7.
Bernal
R, A,, Hafenstein, S., Esmeralda, R., Fane, B. A., Rossmann, M.
G.(2004). The øX174 protein J mediates DNA packaging and
viral attachment to host cells. J Mol Biol. 337: 1109-22.
Garner,
S.A., Everson, J. S., Lambden, P. R., Fane B. A,, Clarke, I. N.
(2004). Isolation, molecular characterisation and genome sequence of a
bacteriophage (Chp3) from Chlamydophila pecorum.
Virus Genes 28: 207-14.
Hafenstein
S. L., Chen, M., Fane, B. A. (2004). Genetic and functional
analyses of the øX174 DNA binding protein: the effects of
substitutions for amino acid residues that spatially organize the two
DNA binding domains. Virology
318: 204-13.
Novak C. R., Fane, B. A. (2004).The functions of the N
terminus of the øX174 internal scaffolding protein, a protein
encoded in an overlapping reading frame in a two scaffolding protein
system. J Mol Biol. 335: 383-90.
Everson,
J. S., Garner, S. A., Lambden, P. R., Fane, B. A.,
Clarke, I. N. (2003). Host range of chlamydiaphages
phiCPAR39 and Chp3.
J Bacteriol. 185: 6490-2.
Fane
B. A., Prevelige, P. E. Jr. (2003) Mechanism of
scaffolding-assisted viral assembly.
Adv Protein Chem. 64: 259-99.
Burch,
A. D., Fane, B. A. (2003) Genetic analyses of putative
conformation switching and cross-species inhibitory domains in
Microviridae external scaffolding proteins. Virology 310:
64-71.
Bernal,
R. A., Hafenstein, S., Olson, N. H., Bowman, V. D., Chipman, P. R.,
Baker, T. S., Fane, B. A., Rossmann, M. G. (2003) Structural
studies of bacteriophage alpha3 assembly. J Mol Biol. 325:
11-24.
Hafenstein,
S., and Fane, B. A. (2002) øX174 genome-capsid interactions
influence the biophysical properties of the virion: evidence for a
scaffolding-like function for the genome during the final stages of
morphogenesis. J. Virol. 76: 5350.
Brentlinger, K. L., Hafenstein, S., Novak, C. R., Fane, B. A.,
Borgon, R., McKenna, R., and Agbandje-McKenna, M. (2002) Microviridae ,
a family divided:
isolation, characterization, and genome sequence of øMH2K, a
bacteriophage
of the obligate intracellular parasitic bacterium Bdellovibrio
bacteriovorus
. J. Bacteriol. 184: 1089.
Everson,
J. S., Garner, S.A., Fane, B., Liu, B. L., Lambden, P. R., and
Clarke, I. N. (2002). Biological properties and cell tropism of Chp2, a
bacteriophage of the obligate intracellular bacterium Chlamydophila
abortus. J. Bacteriol. 184: 2748.
Valentine,
C. R. , Montgomery, B. A., Miller, S. G., Delongchamp, R. R., Fane,
B. A., Malling, H. V. (2002). Characterization of mutant spectra
generated by a forward mutational assay for gene A of Phi X174 from
ENU-treated transgenic mouse embryonic cell line PX-2.
Environ Mol Mutagen. 39: 55-68.
Fane, B. A. (2001) The Genetics of øX174, From nucleotide
sequence
to atomic structure. In: The Encyclopedia of Genetics. Ed: S.
Brenner
and J. Miller. Academic Press, San Diego. pp. 1450-1454.
Burch,
A. D., and Fane, B. A. (2000) Foregin and chimeric scaffolding
proteins as inhibitors of Microviridae morphogenesis. J. Virol. 74:
9347.
Burch,
A. D. and Fane, B. A. (2000) Efficient complementation by chimeric
Microviridae internal scaffolding protein is a function of the
COOH-terminus of the encoded protein. Virology 270: 286 .
Li.u,
B. L, J.S. Everson , B. Fane, P. Giannikopoulou , E. Vretou ,
P.R. Lambden 1and I.N. Clarke (2000). Molecular characterisation of a
bacteriophage (Chp2) from Chlamydiophila psittaci. J. Virol. 74: 3464.
Dokland, T., Bernal, R. A. , Burch, A., Pletnev, S., Fane, B. A.
and
Rossmann, M. G. (1999) The role of scaffolding proteins in the assembly
of
the small, single-stranded, DNA virus øX174. J. Mol. Biol. 288:
595.
Burch, A. D., Ta, J., and Fane, B. A. (1999) Cross-functional
analysis
of the Microviridae internal scaffolding protein. J. Mol. Biol: 286:
95.
Jennings, B. and Fane, B. A. (1997) Genetic analysis of the
øX174 DNA binding protein. Virology: 227: 370.
Dokland, T., R. McKenna, L. L. Ilag, B. R. Bowen, N. L. Incardona,
B.
A. Fane and M. G. Rossmann. (1997) Structure of a viral assembly
intermediate with molecular scaffolding. Nature 389 : 308.
McKenna,
R., Bowman, B. R., Ilag, L. L., Rossmann, M. G., Fane, B. A.
(1996)
Atomic structure of the degraded procapsid particle of the
bacteriophage
G4: induced structural changes in the presence of calcium ions and
functional
implications. J Mol Biol. 256: 736-50.
Ekechukwu
M. C., Oberste, D. J., Fane, B. A. (1995). Host and
øX174
mutations affecting the morphogenesis or stabilization of the 50S
complex,
a single-stranded DNA synthesizing intermediate.
Genetics. 140: 1167-74.
Ekechukwu
M. C., Fane B. A. (1995). Characterization of the morphogenetic
defects
conferred by cold-sensitive prohead accessory and scaffolding proteins
of
øX174. J Bacteriol. 177: 829-30.
Fane
B. A., Shien, S., Hayashi, M. (1993). Second-site suppressors of a
cold-sensitive
external scaffolding protein of bacteriophage phi X174.
Genetics. 134: 1003-11.
Fane
B. A., Head, S., Hayashi, M. (1992). Functional relationship
between
the J proteins of bacteriophages phi X174 and G4 during phage
morphogenesis.
J Bacteriol. 174: 2717-9.
Dalphin M. E., Fane, B. A, Skidmore, M. O., Hayashi, M.
(1992).
Proteolysis of bacteriophage phi X174 prohead accessory protein gpB by
Escherichia
coli OmpT protease is not essential for phage maturation in vivo. J
Bacteriol.
174: 2404-6.
Fane
B. A., Hayashi, M. (1991) Second-site suppressors of a
cold-sensitive
prohead accessory protein of bacteriophage phi X174.
Genetics. 128: 663-71.
